Activity for SNPToolshttps://sourceforge.net/p/snptools/activity/Recent activity for SNPToolsenWed, 30 Apr 2014 19:29:50 -0000Jin Yu posted a comment on ticket #5https://sourceforge.net/p/snptools/tickets/5/?limit=25#17f2Hi, Ashwani The next step is GL. Please check the wiki: https://sourceforge.net/p/snptools/wiki/Best%20practices%20of%20integrated%20SNP%20analysis/...Jin YuWed, 30 Apr 2014 19:29:50 -0000https://sourceforge.net/p/snptools/tickets/5/?limit=25#17f2Yi Wang posted a comment on ticket #5https://sourceforge.net/p/snptools/tickets/5/?limit=25#f9ae/7aabhi all: please be careful, the following command does not works correctly, as hg19.fa...Yi WangWed, 16 Apr 2014 09:39:35 -0000https://sourceforge.net/p/snptools/tickets/5/?limit=25#f9ae/7aabZhuoyi Huang posted a comment on ticket #5https://sourceforge.net/p/snptools/tickets/5/?limit=50#f9aeYou did not post the reads data section but only the BAM header. From this, I guess...Zhuoyi HuangTue, 15 Apr 2014 19:58:24 -0000https://sourceforge.net/p/snptools/tickets/5/?limit=50#f9aeZhuoyi Huang posted a comment on ticket #5https://sourceforge.net/p/snptools/tickets/5/?limit=50#e620Hi Ashwani, Can you check if the 3rd field in your BAM files is "19" or "chr19"?...Zhuoyi HuangMon, 14 Apr 2014 18:46:00 -0000https://sourceforge.net/p/snptools/tickets/5/?limit=50#e620Jin Yu posted a comment on ticket #5https://sourceforge.net/p/snptools/tickets/5/?limit=25#f04aAshwani, "chr" is actually "$chr", it is 19 in your case.Jin YuSat, 12 Apr 2014 19:38:37 -0000https://sourceforge.net/p/snptools/tickets/5/?limit=25#f04aJin Yu posted a comment on ticket #5https://sourceforge.net/p/snptools/tickets/5/?limit=25#ad93Ashwani, does the ebd files have the right path?Jin YuSat, 12 Apr 2014 17:13:05 -0000https://sourceforge.net/p/snptools/tickets/5/?limit=25#ad93Anonymous created ticket #5https://sourceforge.net/p/snptools/tickets/5/Segmentation fault : Failed to read ebd file by varisiteAnonymousSat, 12 Apr 2014 03:45:22 -0000https://sourceforge.net/p/snptools/tickets/5/Anonymous created ticket #4https://sourceforge.net/p/snptools/tickets/4/GL Format AnonymousWed, 08 Jan 2014 09:35:30 -0000https://sourceforge.net/p/snptools/tickets/4/Jin Yu modified a wiki page on snptoolshttps://sourceforge.net/p/snptools/wiki/Best%2520practices%2520with%2520SNPTools/Best practices with SNPToolsJin YuTue, 31 Dec 2013 07:13:16 -0000https://sourceforge.net/p/snptools/wiki/Best%20practices%20with%20SNPTools/Jin Yu committed [2a48f9]https://sourceforge.net/p/snptools/code/ci/2a48f950b87af0870a19399dfe694d1390ffc326/tweak makefile to make it compatible to latest gccJin YuMon, 30 Dec 2013 17:57:59 -0000https://sourceforge.net/p/snptools/code/ci/2a48f950b87af0870a19399dfe694d1390ffc326/